Flights from Tokyo to Kota Kinabalu – Direct & connecting routes
Non-stop airlines Connecting flights Show map Price search
NRT to BKI – All flight route options from Narita International Airport, Japan to Kota Kinabalu International, Malaysia. These flights are operated by 14 airlines. Fly non-stop with Malaysia Airlines or choose from 5 different transit flights. The shortest flight time is 6 hours and 30 minutes. See the full flight schedule and time table, including departure times, airlines and stopover details to find the best option for you.
Find the best prices on hotels and car rental near Kota Kinabalu
We got great deals on hotels and car rentals near the airport.
Tokyo to Kota Kinabalu flights
With over 161 flights every week and 6 different airlines you have a wide range of options. You can fly non-stop to Kota Kinabalu (BKI) from Tokyo (NRT) with Malaysia Airlines but if a stopover option suits you better you can choose to fly via Bandar Seri Begawan, Busan or any other of the 5 alternatives with connectiing airports.
Tip! You can also fly to Kota Kinabalu from Haneda Airport (HND).
Tokyo to Kota Kinabalu with Malaysia Airlines
Malaysia Airlines has non-stop every Monday or Thursday at 09:30. Malaysia Airlines is a member of the air alliance OneWorld.
With Royal Brunei Airlines
If you fly from Tokyo with Royal Brunei Airlines you will do a stopover in Bandar Seri Begawan, BWN before reaching Kota Kinabalu. This flight trip will take 9 hours and 38 minutes and you can fly every Monday or Friday with departures at 11:45.
Distance & flight times: Narita International Airport to Kota Kinabalu International
The shortest flight time between NRT and BKI is 6 hours and 30 minutes.
Via | Total flight time | Layover time | Distance |
---|---|---|---|
Direct | 6h 30m | - | 2589 miles (4166 km) |
BWN Bandar Seri Begawan | 9h 38m | 3h 5m | 2795 miles (4497 km) |
PUS Busan | 11h 20m | 4h 10m | 2840 miles (4570 km) |
ICN Seoul | 11h 20m | 4h 40m | 3072 miles (4943 km) |
PVG Shanghai | 11h 45m | 3h 55m | 2913 miles (4687 km) |
CAN Guangzhou | 11h 55m | 4h 35m | 3066 miles (4933 km) |


Quick copy and share this page
From Tokyo to Malaysia
Below is a list of other destinations to Malaysia from Narita International Airport with either direct flights or 1 stop connections.
From Japan to Kota Kinabalu
Below is a list of other cities in Japan with flights to Kota Kinabalu with either non-stop or connecting flights.